SHOGoiN Cell Transcriptome: GSM1280182

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280182


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T216Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 120.7137
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 68.7651
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 60.5806
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 43.9760
5 ENSMUSG00000101111 Gm28437 predicted gene 28437 41.1077
6 ENSMUSG00000097971 Gm26917 predicted gene, 26917 40.4607
7 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 38.1016
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 35.0066
9 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 32.8543
10 ENSMUSG00000100862 Gm10925 predicted gene 10925 30.9621

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108247 Gm19039 predicted gene, 19039 -0.0838
46623 ENSMUSG00000108245 Prb3-ps proline-rich protein BstNI subfamily 3, pseudogene -0.0838
46622 ENSMUSG00000108244 Gm44077 predicted gene, 44077 -0.0838
46621 ENSMUSG00000108242 9330118I20Rik RIKEN cDNA 9330118I20 gene -0.0838
46620 ENSMUSG00000108241 Gm44252 predicted gene, 44252 -0.0838
46619 ENSMUSG00000108240 Gm5317 predicted gene 5317 -0.0838
46618 ENSMUSG00000108239 Gm19434 predicted gene, 19434 -0.0838
46617 ENSMUSG00000108238 Gm43984 predicted gene, 43984 -0.0838
46616 ENSMUSG00000108237 Gm19757 predicted gene, 19757 -0.0838
46615 ENSMUSG00000108235 Gm44248 predicted gene, 44248 -0.0838

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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