SHOGoiN Cell Transcriptome: GSM1280192

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280192


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T226Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 86.7359
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 79.0073
3 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 72.5138
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 41.7343
5 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 37.9666
6 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 33.3816
7 ENSMUSG00000026234 Ncl nucleolin 25.0423
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 23.5918
9 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 23.4526
10 ENSMUSG00000064356 mt-Atp8 mitochondrially encoded ATP synthase 8 23.1472

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1507
46623 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1507
46622 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1507
46621 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1507
46620 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1507
46619 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1507
46618 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1507
46617 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.1507
46616 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.1507
46615 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.1507

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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