SHOGoiN Cell Transcriptome: GSM1280200

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280200


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T234Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 93.7703
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 66.3802
3 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 66.0691
4 ENSMUSG00000060143 Gm10076 predicted gene 10076 48.0098
5 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 40.6257
6 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 33.8121
7 ENSMUSG00000028234 Rps20 ribosomal protein S20 28.6899
8 ENSMUSG00000074800 Gm4149 predicted pseudogene 4149 26.3802
9 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 25.5624
10 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 24.8004

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1084
46623 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1084
46622 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1084
46621 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1084
46620 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1084
46619 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1084
46618 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.1084
46617 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.1084
46616 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.1084
46615 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.1084

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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