SHOGoiN Cell Transcriptome: GSM1280201

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280201


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T235Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 122.0225
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 75.3779
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 60.7010
4 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 59.5206
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 42.6621
6 ENSMUSG00000101111 Gm28437 predicted gene 28437 40.1820
7 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 38.8963
8 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 30.2264
9 ENSMUSG00000031765 Mt1 metallothionein 1 29.1620
10 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 27.6866

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0795
46623 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0795
46622 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.0795
46621 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.0795
46620 ENSMUSG00000108302 Gm18207 predicted gene, 18207 -0.0795
46619 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.0795
46618 ENSMUSG00000108300 Gm44539 predicted gene 44539 -0.0795
46617 ENSMUSG00000108299 Gm43892 predicted gene, 43892 -0.0795
46616 ENSMUSG00000108298 Gm44226 predicted gene, 44226 -0.0795
46615 ENSMUSG00000108297 Gm44167 predicted gene, 44167 -0.0795

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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