SHOGoiN Cell Transcriptome: GSM1280202

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280202


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T236Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 111.0617
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 70.7385
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 66.7141
4 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 45.2774
5 ENSMUSG00000101111 Gm28437 predicted gene 28437 41.1686
6 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 35.8966
7 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 32.9190
8 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 32.6922
9 ENSMUSG00000100862 Gm10925 predicted gene 10925 30.0344
10 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 29.9152

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0852
46623 ENSMUSG00000108325 Gm44898 predicted gene 44898 -0.0852
46622 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.0852
46621 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.0852
46620 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.0852
46619 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.0852
46618 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.0852
46617 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.0852
46616 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0852
46615 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0852

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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