SHOGoiN Cell Transcriptome: GSM1280207

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280207


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T241Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 83.6082
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 74.3828
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 39.6929
4 ENSMUSG00000060143 Gm10076 predicted gene 10076 38.5205
5 ENSMUSG00000030744 Rps3 ribosomal protein S3 33.1948
6 ENSMUSG00000074129 Rpl13a ribosomal protein L13A 32.0972
7 ENSMUSG00000057113 Npm1 nucleophosmin 1 30.3303
8 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 28.5717
9 ENSMUSG00000105879 Gm6204 predicted gene 6204 28.1767
10 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 27.8774

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1231
46623 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.1231
46622 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.1231
46621 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.1231
46620 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.1231
46619 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.1231
46618 ENSMUSG00000108302 Gm18207 predicted gene, 18207 -0.1231
46617 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.1231
46616 ENSMUSG00000108300 Gm44539 predicted gene 44539 -0.1231
46615 ENSMUSG00000108299 Gm43892 predicted gene, 43892 -0.1231

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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