SHOGoiN Cell Transcriptome: GSM1280210

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280210


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T244Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 102.6923
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 68.4943
3 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 55.7860
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 46.8770
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 44.5923
6 ENSMUSG00000060143 Gm10076 predicted gene 10076 39.3635
7 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 31.0799
8 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 30.9863
9 ENSMUSG00000101111 Gm28437 predicted gene 28437 28.9058
10 ENSMUSG00000102070 Gm28661 predicted gene 28661 27.9783

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108324 Gm44608 predicted gene 44608 -0.1059
46623 ENSMUSG00000108323 Gm44945 predicted gene 44945 -0.1059
46622 ENSMUSG00000108322 5430431A17Rik RIKEN cDNA 5430431A17 gene -0.1059
46621 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.1059
46620 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1059
46619 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1059
46618 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1059
46617 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1059
46616 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1059
46615 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1059

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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