SHOGoiN Cell Transcriptome: GSM1280217

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280217


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T251Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 73.6538
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 57.6646
3 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 52.6110
4 ENSMUSG00000060143 Gm10076 predicted gene 10076 41.9670
5 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 34.7429
6 ENSMUSG00000057113 Npm1 nucleophosmin 1 31.6978
7 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 31.6145
8 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 31.5775
9 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 31.5266
10 ENSMUSG00000030744 Rps3 ribosomal protein S3 29.9254

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.1139
46623 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1139
46622 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1139
46621 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1139
46620 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1139
46619 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1139
46618 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1139
46617 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1139
46616 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1139
46615 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1139

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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