SHOGoiN Cell Transcriptome: GSM1280218

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280218


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T252Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 110.6176
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 87.6124
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 53.9633
4 ENSMUSG00000060143 Gm10076 predicted gene 10076 33.9814
5 ENSMUSG00000029580 Actb actin, beta 23.6666
6 ENSMUSG00000049775 Tmsb4x thymosin, beta 4, X chromosome 23.3231
7 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 23.2587
8 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 22.0387
9 ENSMUSG00000074800 Gm4149 predicted pseudogene 4149 21.6631
10 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 21.6523

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1149
46623 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1149
46622 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1149
46621 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1149
46620 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1149
46619 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1149
46618 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1149
46617 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1149
46616 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1149
46615 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1149

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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