SHOGoiN Cell Transcriptome: GSM1280221

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280221


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T255Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 157.8153
2 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 56.4486
3 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 53.1260
4 ENSMUSG00000101111 Gm28437 predicted gene 28437 50.1029
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 48.9564
6 ENSMUSG00000100862 Gm10925 predicted gene 10925 43.9959
7 ENSMUSG00000064358 mt-Co3 mitochondrially encoded cytochrome c oxidase III 42.7371
8 ENSMUSG00000064357 mt-Atp6 mitochondrially encoded ATP synthase 6 42.0866
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 35.9890
10 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 32.1797

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108336 Olfr163-ps1 olfactory receptor 163, pseudogene 1 -0.0212
46623 ENSMUSG00000108335 Gm45215 predicted gene 45215 -0.0212
46622 ENSMUSG00000108333 Gm45095 predicted gene 45095 -0.0212
46621 ENSMUSG00000108332 D530033B14Rik RIKEN cDNA D530033B14 gene -0.0212
46620 ENSMUSG00000108331 Gm5322 predicted gene 5322 -0.0212
46619 ENSMUSG00000108330 Gm44882 predicted gene 44882 -0.0212
46618 ENSMUSG00000108329 Gm44725 predicted gene 44725 -0.0212
46617 ENSMUSG00000108328 Gm45196 predicted gene 45196 -0.0212
46616 ENSMUSG00000108327 Gm44939 predicted gene 44939 -0.0212
46615 ENSMUSG00000108326 Gm17838 predicted gene, 17838 -0.0212

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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