SHOGoiN Cell Transcriptome: GSM1280224

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280224


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T258Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 78.3344
2 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 71.7631
3 ENSMUSG00000060143 Gm10076 predicted gene 10076 48.6424
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 40.6263
5 ENSMUSG00000046721 Rpl14-ps1 ribosomal protein L14, pseudogene 1 29.8519
6 ENSMUSG00000063696 Gm8730 predicted pseudogene 8730 29.0598
7 ENSMUSG00000028691 Prdx1 peroxiredoxin 1 29.0557
8 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 28.9079
9 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 28.7601
10 ENSMUSG00000057113 Npm1 nucleophosmin 1 28.1650

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1192
46623 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.1192
46622 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1192
46621 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1192
46620 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1192
46619 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1192
46618 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1192
46617 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1192
46616 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.1192
46615 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.1192

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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