SHOGoiN Cell Transcriptome: GSM1280233

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280233


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T267Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 120.3351
2 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 68.0270
3 ENSMUSG00000098178 Gm42418 predicted gene, 42418 50.1986
4 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 47.6594
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 47.6259
6 ENSMUSG00000101111 Gm28437 predicted gene 28437 40.8046
7 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 36.8283
8 ENSMUSG00000064354 mt-Co2 mitochondrially encoded cytochrome c oxidase II 33.4679
9 ENSMUSG00000064337 mt-Rnr1 mitochondrially encoded 12S rRNA 33.3045
10 ENSMUSG00000102070 Gm28661 predicted gene 28661 30.7612

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.0773
46623 ENSMUSG00000108317 Gm44663 predicted gene 44663 -0.0773
46622 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.0773
46621 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.0773
46620 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.0773
46619 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.0773
46618 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0773
46617 ENSMUSG00000108310 Gm44712 predicted gene 44712 -0.0773
46616 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0773
46615 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0773

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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