SHOGoiN Cell Transcriptome: GSM1280238

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280238


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T272Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 73.8523
2 ENSMUSG00000098178 Gm42418 predicted gene, 42418 65.1404
3 ENSMUSG00000060143 Gm10076 predicted gene 10076 48.2363
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 38.3035
5 ENSMUSG00000060461 Dppa5a developmental pluripotency associated 5A 37.9191
6 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 34.8870
7 ENSMUSG00000105879 Gm6204 predicted gene 6204 29.5608
8 ENSMUSG00000095288 Gm7618 predicted pseudogene 7618 28.6291
9 ENSMUSG00000096942 Rps19-ps6 ribosomal protein S19, pseudogene 6 28.4476
10 ENSMUSG00000023944 Hsp90ab1 heat shock protein 90 alpha (cytosolic), class B member 1 27.5466

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108321 Gm44649 predicted gene 44649 -0.1114
46623 ENSMUSG00000108320 Gm44877 predicted gene 44877 -0.1114
46622 ENSMUSG00000108319 Gm44552 predicted gene 44552 -0.1114
46621 ENSMUSG00000108318 Gm45170 predicted gene 45170 -0.1114
46620 ENSMUSG00000108316 Gm44589 predicted gene 44589 -0.1114
46619 ENSMUSG00000108315 Gm44601 predicted gene 44601 -0.1114
46618 ENSMUSG00000108314 Prkcz2 protein kinase C, zeta 2 -0.1114
46617 ENSMUSG00000108313 Gm45052 predicted gene 45052 -0.1114
46616 ENSMUSG00000108312 Gm44521 predicted gene 44521 -0.1114
46615 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.1114

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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