SHOGoiN Cell Transcriptome: GSM1280253

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1280253


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7020001000000000000000-715Sequence Read ArchiveSRP022764SRP022764_T287Quantitative single-cell RNA-seqTranscriptomeEmbryonic stem cellMouseEarly embryonic tissueRNA-SeqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000098178 Gm42418 predicted gene, 42418 121.4255
2 ENSMUSG00000092341 Malat1 metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA) 97.8370
3 ENSMUSG00000064339 mt-Rnr2 mitochondrially encoded 16S rRNA 64.1504
4 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 35.3870
5 ENSMUSG00000064341 mt-Nd1 mitochondrially encoded NADH dehydrogenase 1 31.5376
6 ENSMUSG00000029580 Actb actin, beta 30.8342
7 ENSMUSG00000021270 Hsp90aa1 heat shock protein 90, alpha (cytosolic), class A member 1 29.2916
8 ENSMUSG00000064370 mt-Cytb mitochondrially encoded cytochrome b 28.0673
9 ENSMUSG00000049775 Tmsb4x thymosin, beta 4, X chromosome 27.7026
10 ENSMUSG00000060143 Gm10076 predicted gene 10076 22.8402

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.1057
46623 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.1057
46622 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.1057
46621 ENSMUSG00000108302 Gm18207 predicted gene, 18207 -0.1057
46620 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.1057
46619 ENSMUSG00000108300 Gm44539 predicted gene 44539 -0.1057
46618 ENSMUSG00000108299 Gm43892 predicted gene, 43892 -0.1057
46617 ENSMUSG00000108298 Gm44226 predicted gene, 44226 -0.1057
46616 ENSMUSG00000108297 Gm44167 predicted gene, 44167 -0.1057
46615 ENSMUSG00000108295 Gm36406 predicted gene, 36406 -0.1057

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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