SHOGoiN Cell Transcriptome: GSM1297638

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1297638


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6000007000000000000000-803Sequence Read ArchiveSRP034712SRP034712_T15Characterization of differentiating adipose cells by high-throughput single-cell TranscriptomeAdipose Derived Stem CellHumanAdipose tissueRNA-seqHiSeq 2000Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000089009 RPL6 ribosomal protein L6 182.1845
2 ENSG00000167995 BEST1 bestrophin 1 98.6298
3 ENSG00000198695 MT-ND6 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 6 56.8317
4 ENSG00000180139 ACTA2-AS1 ACTA2 antisense RNA 1 38.8868
5 ENSG00000269968 novel transcript, antisense to GAPDH 34.3294
6 ENSG00000182993 C12orf60 chromosome 12 open reading frame 60 30.3155
7 ENSG00000157734 SNX22 sorting nexin 22 27.2332
8 ENSG00000270641 TSIX TSIX transcript, XIST antisense RNA 21.5863
9 ENSG00000108821 COL1A1 collagen type I alpha 1 chain 18.2789
10 ENSG00000218537 MIF-AS1 MIF antisense RNA 1 17.8234

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.0412
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.0412
58733 ENSG00000285992 novel transcript -0.0412
58732 ENSG00000285991 novel transcript -0.0412
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.0412
58730 ENSG00000285989 TEC -0.0412
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.0412
58728 ENSG00000285987 NA -0.0412
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.0412
58726 ENSG00000285985 NA -0.0412

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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