SHOGoiN Cell Transcriptome: GSM1524287

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1524287


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3120102000001000000000-089Sequence Read ArchiveSRP048838SRP048838_T6Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeSingle cell from whole intestinal organoids (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 147.3824
2 ENSMUSG00000025466 Fuom fucose mutarotase 103.0323
3 ENSMUSG00000097554 Gm26825 predicted gene, 26825 67.6533
4 ENSMUSG00000075015 Gm10801 predicted gene 10801 60.2300
5 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 55.9972
6 ENSMUSG00000110588 Gm45774 predicted gene 45774 54.3862
7 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 36.7598
8 ENSMUSG00000058174 Gm5148 predicted gene 5148 27.0306
9 ENSMUSG00000029580 Actb actin, beta 26.2093
10 ENSMUSG00000074373 Gm10680 predicted gene 10680 22.7346

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0406
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0406
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0406
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0406
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0406
54519 ENSMUSG00000117327 NA -0.0406
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0406
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0406
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0406
54515 ENSMUSG00000117323 novel transcript -0.0406

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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