SHOGoiN Cell Transcriptome: GSM1524292

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1524292


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3120102000001000000000-089Sequence Read ArchiveSRP048838SRP048838_T11Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeSingle cell from whole intestinal organoids (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000075014 Gm10800 predicted gene 10800 211.0906
2 ENSMUSG00000075015 Gm10801 predicted gene 10801 89.4010
3 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 22.2117
4 ENSMUSG00000097554 Gm26825 predicted gene, 26825 19.5526
5 ENSMUSG00000029580 Actb actin, beta 16.7470
6 ENSMUSG00000095280 Gm21738 predicted gene, 21738 12.6313
7 ENSMUSG00000064351 mt-Co1 mitochondrially encoded cytochrome c oxidase I 10.2363
8 ENSMUSG00000025466 Fuom fucose mutarotase 9.8355
9 ENSMUSG00000110588 Gm45774 predicted gene 45774 6.7072
10 ENSMUSG00000074373 Gm10680 predicted gene 10680 6.1988

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0186
54523 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0186
54522 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0186
54521 ENSMUSG00000117327 NA -0.0186
54520 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0186
54519 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0186
54518 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0186
54517 ENSMUSG00000117323 novel transcript -0.0186
54516 ENSMUSG00000117322 novel transcript, antisense to Zfp213 -0.0186
54515 ENSMUSG00000117321 ribosomal protein S27 (Rps27) pseudogene -0.0186

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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