SHOGoiN Cell Transcriptome: GSM1524297

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1524297


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3120200000000000000000-086Sequence Read ArchiveSRP048838SRP048838_T16Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeReg4-positive intestinal cell (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
2 ENSMUSG00000075014 Gm10800 predicted gene 10800 83.6429
3 ENSMUSG00000058174 Gm5148 predicted gene 5148 64.1579
4 ENSMUSG00000097554 Gm26825 predicted gene, 26825 56.2908
5 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 56.1993
6 ENSMUSG00000064352 mt-Ts1 mitochondrially encoded tRNA serine 1 37.4462
7 ENSMUSG00000052917 Senp7 SUMO1/sentrin specific peptidase 7 33.9700
8 ENSMUSG00000056204 Pgpep1 pyroglutamyl-peptidase I 25.6912
9 ENSMUSG00000043633 Fam221b family with sequence similarity 221, member B 20.3397
10 ENSMUSG00000036560 Lgi4 leucine-rich repeat LGI family, member 4 19.7908
46615 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.0600

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108311 Gm44737 predicted gene 44737 -0.0600
46623 ENSMUSG00000108309 Gm44703 predicted gene 44703 -0.0600
46622 ENSMUSG00000108308 Gm45218 predicted gene 45218 -0.0600
46621 ENSMUSG00000108307 Ceacam-ps1 carcinoembryonic antigen-related cell adhesion molecule pseudogene 1 -0.0600
46620 ENSMUSG00000108306 Gm44640 predicted gene 44640 -0.0600
46619 ENSMUSG00000108305 Gm19078 predicted gene, 19078 -0.0600
46618 ENSMUSG00000108304 Gm4607 predicted gene 4607 -0.0600
46617 ENSMUSG00000108303 Gm39075 predicted gene, 39075 -0.0600
46616 ENSMUSG00000108302 Gm18207 predicted gene, 18207 -0.0600
46615 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.0600

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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