SHOGoiN Cell Transcriptome: GSM1524298

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1524298


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3120200000000000000000-086Sequence Read ArchiveSRP048838SRP048838_T17Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeReg4-positive intestinal cell (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000058174 Gm5148 predicted gene 5148 100.8397
2 ENSMUSG00000097554 Gm26825 predicted gene, 26825 97.4348
3 ENSMUSG00000075014 Gm10800 predicted gene 10800 91.8630
4 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 66.1711
5 ENSMUSG00000029580 Actb actin, beta 56.8848
6 ENSMUSG00000075015 Gm10801 predicted gene 10801 42.0268
7 ENSMUSG00000013973 Dedd death effector domain-containing 41.7173
8 ENSMUSG00000056201 Cfl1 cofilin 1, non-muscle 32.4311
9 ENSMUSG00000113198 Gm6988 predicted gene 6988 28.7166
10 ENSMUSG00000043633 Fam221b family with sequence similarity 221, member B 23.7639

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
54524 ENSMUSG00000117332 TEC -0.0708
54523 ENSMUSG00000117331 exocrine gland-secreting peptide pseudogene -0.0708
54522 ENSMUSG00000117330 ribosomal protein L18A (Rpl18a) pseudogene -0.0708
54521 ENSMUSG00000117329 zinc finger protein 541 (Zfp541) pseudogene -0.0708
54520 ENSMUSG00000117328 novel transcript, antisense to Smoc2 -0.0708
54519 ENSMUSG00000117327 NA -0.0708
54518 ENSMUSG00000117326 zinc ribbon domain containing 1, antisense (Znrd1as) pseudogene -0.0708
54517 ENSMUSG00000117325 Opa interacting protein 5 (Oip5) pseudogene -0.0708
54516 ENSMUSG00000117324 novel transcript, antisense to Dscam -0.0708
54515 ENSMUSG00000117323 novel transcript -0.0708

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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