SHOGoiN Cell Transcriptome: GSM1625893

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1625893


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3120102010200000000000-082Sequence Read ArchiveSRP048838SRP048838_T26Single-Cell mRNA Sequencing Reveals Rare Intestinal Cell TypesTranscriptomeLgr5-positive intestinal cell (CBC cell) (Intestinal gland)MouseSmall intestineRNA-SeqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSMUSG00000064368 mt-Nd6 mitochondrially encoded NADH dehydrogenase 6 151.3839
2 ENSMUSG00000058174 Gm5148 predicted gene 5148 78.9867
4 ENSMUSG00000097554 Gm26825 predicted gene, 26825 56.0132
5 ENSMUSG00000064352 mt-Ts1 mitochondrially encoded tRNA serine 1 52.3511
6 ENSMUSG00000075014 Gm10800 predicted gene 10800 38.1480
7 ENSMUSG00000097154 Gm26510 predicted gene, 26510 28.3392
8 ENSMUSG00000023050 Map3k12 mitogen-activated protein kinase kinase kinase 12 17.0008
9 ENSMUSG00000030126 Tmcc1 transmembrane and coiled coil domains 1 15.9439
10 ENSMUSG00000029580 Actb actin, beta 14.5904
46615 ENSMUSG00000108290 Gm44120 predicted gene, 44120 -0.0485

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
46624 ENSMUSG00000108301 Gm45127 predicted gene 45127 -0.0485
46623 ENSMUSG00000108300 Gm44539 predicted gene 44539 -0.0485
46622 ENSMUSG00000108299 Gm43892 predicted gene, 43892 -0.0485
46621 ENSMUSG00000108298 Gm44226 predicted gene, 44226 -0.0485
46620 ENSMUSG00000108296 Gm44295 predicted gene, 44295 -0.0485
46619 ENSMUSG00000108295 Gm36406 predicted gene, 36406 -0.0485
46618 ENSMUSG00000108294 Gm44429 predicted gene, 44429 -0.0485
46617 ENSMUSG00000108293 Pla2g4c-ps phospholipase A2, group IVC (cytosolic, calcium-independent), pseudogene -0.0485
46616 ENSMUSG00000108292 Gm44050 predicted gene, 44050 -0.0485
46615 ENSMUSG00000108290 Gm44120 predicted gene, 44120 -0.0485

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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