SHOGoiN Cell Transcriptome: GSM1677473

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677473


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T1The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 113.7774
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 62.3174
3 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 56.0496
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 48.6392
5 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 43.1489
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.0384
7 ENSG00000217027 TPT1P4 tumor protein, translationally-controlled 1 pseudogene 4 33.5170
8 ENSG00000283041 NA 32.7394
9 ENSG00000184009 ACTG1 actin gamma 1 32.2951
10 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 30.5655

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277203 F8A1 coagulation factor VIII associated 1 -0.1232
57170 ENSG00000277202 MIR8063 microRNA 8063 -0.1232
57168 ENSG00000277200 NA -0.1232
57167 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.1232
57166 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.1232
57164 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.1232
57162 ENSG00000277191 NA -0.1232
10 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 30.5655
9 ENSG00000184009 ACTG1 actin gamma 1 32.2951
8 ENSG00000283041 NA 32.7394

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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