SHOGoiN Cell Transcriptome: GSM1677474

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677474


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T2The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 92.1779
2 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 59.6924
3 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 55.3798
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 53.2267
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 47.6026
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 47.2241
7 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 45.0319
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 40.6409
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.2251
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 35.1408

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277133 NA -0.1241
57170 ENSG00000277130 NA -0.1241
57169 ENSG00000277129 NA -0.1241
57168 ENSG00000277128 NA -0.1241
57167 ENSG00000277127 NA -0.1241
57166 ENSG00000277125 NA -0.1241
57165 ENSG00000277124 NA -0.1241
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 35.1408
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.2251
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 40.6409

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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