SHOGoiN Cell Transcriptome: GSM1677475

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677475


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T3The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 104.3157
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 50.3432
3 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 46.0839
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.1435
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 40.8587
6 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 40.7473
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 40.4501
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 38.4443
9 ENSG00000184009 ACTG1 actin gamma 1 31.2256
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 25.9138

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277206 NA -0.1376
57169 ENSG00000277202 MIR8063 microRNA 8063 -0.1376
57167 ENSG00000277200 NA -0.1376
57166 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.1376
57165 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.1376
57163 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.1376
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 25.9138
9 ENSG00000184009 ACTG1 actin gamma 1 31.2256
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 38.4443
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 40.4501

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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