SHOGoiN Cell Transcriptome: GSM1677476

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677476


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T4The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 95.3126
2 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 56.2407
3 ENSG00000196230 TUBB tubulin beta class I 43.7239
4 ENSG00000070756 PABPC1 poly(A) binding protein cytoplasmic 1 43.0545
5 ENSG00000152558 TMEM123 transmembrane protein 123 42.6893
6 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 36.7251
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.2739
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 29.4016
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 28.4076
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.6367

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1356
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1356
58733 ENSG00000285992 novel transcript -0.1356
58732 ENSG00000285991 novel transcript -0.1356
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1356
58730 ENSG00000285989 TEC -0.1356
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1356
58728 ENSG00000285987 NA -0.1356
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1356
58726 ENSG00000285985 NA -0.1356

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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