SHOGoiN Cell Transcriptome: GSM1677476

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677476


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T4The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 71.4199
2 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 66.3164
3 ENSG00000152558 TMEM123 transmembrane protein 123 46.7457
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 42.3418
5 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 38.0202
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 36.2710
7 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 35.3038
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 34.9334
9 ENSG00000283041 NA 32.7314
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 32.6491

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.1538
57169 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.1538
57167 ENSG00000277191 NA -0.1538
57165 ENSG00000277188 NA -0.1538
57164 ENSG00000277186 NA -0.1538
57163 ENSG00000277184 SNORA9 small nucleolar RNA, H/ACA box 9 -0.1538
57162 ENSG00000277182 NA -0.1538
10 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 32.6491
9 ENSG00000283041 NA 32.7314
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 34.9334

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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