SHOGoiN Cell Transcriptome: GSM1677477

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677477


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T5The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 91.9031
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 76.7317
3 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 74.7182
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 58.4112
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 41.9287
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 38.0070
7 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 36.5671
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.6757
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.1773
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 32.1421

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277203 F8A1 coagulation factor VIII associated 1 -0.1206
57170 ENSG00000277202 MIR8063 microRNA 8063 -0.1206
57168 ENSG00000277200 NA -0.1206
57167 ENSG00000277199 LINC01632 long intergenic non-protein coding RNA 1632 -0.1206
57166 ENSG00000277198 RN7SL270P RNA, 7SL, cytoplasmic 270, pseudogene -0.1206
57164 ENSG00000277194 SNORD22 small nucleolar RNA, C/D box 22 -0.1206
57162 ENSG00000277191 NA -0.1206
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 32.1421
9 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 32.1773
8 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 33.6757

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...