SHOGoiN Cell Transcriptome: GSM1677478

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677478


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T6The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 91.0633
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 46.5845
3 ENSG00000123416 TUBA1B tubulin alpha 1b 41.5114
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.3021
5 ENSG00000258017 NA 39.1531
6 ENSG00000167553 TUBA1C tubulin alpha 1c 36.3541
7 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 35.9524
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 31.3264
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.5877
10 ENSG00000258232 NA 30.3998

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277151 NA -0.1489
57170 ENSG00000277150 F8A3 coagulation factor VIII associated 3 -0.1489
57169 ENSG00000277149 TYW1B tRNA-yW synthesizing protein 1 homolog B -0.1489
57168 ENSG00000277147 LINC00869 long intergenic non-protein coding RNA 869 -0.1489
57167 ENSG00000277146 NA -0.1489
57165 ENSG00000277144 NA -0.1489
57164 ENSG00000277143 NA -0.1489
57163 ENSG00000277142 LINC00235 long intergenic non-protein coding RNA 235 -0.1489
57162 ENSG00000277141 NA -0.1489
10 ENSG00000258232 NA 30.3998

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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