SHOGoiN Cell Transcriptome: GSM1677479

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677479


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T7The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 124.4057
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 95.9734
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 75.2523
4 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 52.3927
5 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 37.7995
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 37.5185
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 34.3929
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 32.4599
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 31.9595
10 ENSG00000184009 ACTG1 actin gamma 1 31.5963

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277103 NA -0.1125
57167 ENSG00000277099 NA -0.1125
57165 ENSG00000277096 NA -0.1125
57164 ENSG00000277095 NA -0.1125
57162 ENSG00000277089 NA -0.1125
10 ENSG00000184009 ACTG1 actin gamma 1 31.5963
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 31.9595
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 32.4599
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 34.3929
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 37.5185

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...