SHOGoiN Cell Transcriptome: GSM1677480

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677480


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T8The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 103.3743
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 55.3141
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 52.9105
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 45.6745
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 41.4431
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 36.3980
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 33.7815
8 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 30.1385
9 ENSG00000082898 XPO1 exportin 1 25.0183
10 ENSG00000283041 NA 24.3172

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1698
57169 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1698
57168 ENSG00000277057 MIR6779 microRNA 6779 -0.1698
57167 ENSG00000277056 NA -0.1698
57165 ENSG00000277052 MIR6763 microRNA 6763 -0.1698
57164 ENSG00000277051 NA -0.1698
57163 ENSG00000277050 NA -0.1698
57162 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1698
10 ENSG00000283041 NA 24.3172
9 ENSG00000082898 XPO1 exportin 1 25.0183

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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