SHOGoiN Cell Transcriptome: GSM1677481

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677481


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T9The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 106.3131
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 72.1715
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 57.0812
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 54.1144
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 46.2485
6 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 37.7572
7 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.0516
8 ENSG00000283041 NA 36.9554
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.2533
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 29.4824

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277073 MIR6131 microRNA 6131 -0.1450
57170 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1450
57169 ENSG00000277067 uncharacterized LOC102724843 -0.1450
57168 ENSG00000277066 NA -0.1450
57166 ENSG00000277063 MIR8084 microRNA 8084 -0.1450
57165 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.1450
57163 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.1450
57162 ENSG00000277057 MIR6779 microRNA 6779 -0.1450
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 29.4824
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.2533

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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