SHOGoiN Cell Transcriptome: GSM1677482

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677482


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T10The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 113.3261
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 93.2718
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 78.1587
4 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 47.4507
5 ENSG00000133112 TPT1 tumor protein, translationally-controlled 1 43.0235
6 ENSG00000080824 HSP90AA1 heat shock protein 90 alpha family class A member 1 35.7690
7 ENSG00000184009 ACTG1 actin gamma 1 33.5778
8 ENSG00000196230 TUBB tubulin beta class I 32.7489
9 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 32.3377
10 ENSG00000109971 HSPA8 heat shock protein family A (Hsp70) member 8 28.9642

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
58735 ENSG00000285994 novel transcript, sense intronic to CAMK1D -0.1052
58734 ENSG00000285993 novel transcript, antisense to RNF165 -0.1052
58733 ENSG00000285992 novel transcript -0.1052
58732 ENSG00000285991 novel transcript -0.1052
58731 ENSG00000285990 neurobeachin (NBEA) pseudogene -0.1052
58730 ENSG00000285989 TEC -0.1052
58729 ENSG00000285988 novel transcript, LINP1-LINC00707 readthrough -0.1052
58728 ENSG00000285987 NA -0.1052
58727 ENSG00000285986 complement factor H related 3 (CFHR3) pseudogene -0.1052
58726 ENSG00000285985 NA -0.1052

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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