SHOGoiN Cell Transcriptome: GSM1677482

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677482


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T10The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 116.3433
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 88.3918
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 86.2931
4 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 55.2249
5 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 45.3560
6 ENSG00000210082 MT-RNR2 mitochondrially encoded 16S RNA 38.3478
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 37.3671
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 33.5070
9 ENSG00000184009 ACTG1 actin gamma 1 32.8137
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 26.2365

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277127 NA -0.1159
57170 ENSG00000277125 NA -0.1159
57169 ENSG00000277124 NA -0.1159
57165 ENSG00000277120 MIR6089 microRNA 6089 -0.1159
57164 ENSG00000277119 NA -0.1159
57163 ENSG00000277118 NA -0.1159
57162 ENSG00000277117 ICOS ligand -0.1159
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 26.2365
9 ENSG00000184009 ACTG1 actin gamma 1 32.8137
8 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 33.5070

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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