SHOGoiN Cell Transcriptome: GSM1677484

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677484


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T12The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 155.8357
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 74.9436
3 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 67.2098
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 66.9183
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 50.1954
6 ENSG00000184009 ACTG1 actin gamma 1 41.5441
7 ENSG00000283041 NA 33.2538
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.1644
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.0380
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 28.9580

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277117 ICOS ligand -0.0893
57168 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0893
57167 ENSG00000277109 NA -0.0893
57166 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0893
57163 ENSG00000277103 NA -0.0893
10 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 28.9580
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.0380
8 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 33.1644
7 ENSG00000283041 NA 33.2538
6 ENSG00000184009 ACTG1 actin gamma 1 41.5441

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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