SHOGoiN Cell Transcriptome: GSM1677488

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677488


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T16The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 160.4509
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 84.9715
3 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 62.4886
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 44.7110
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 43.0438
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 41.4474
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 33.1335
8 ENSG00000184009 ACTG1 actin gamma 1 32.1916
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 32.0943
10 ENSG00000123416 TUBA1B tubulin alpha 1b 22.1265

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277047 NA -0.0955
57169 ENSG00000277041 NA -0.0955
57168 ENSG00000277040 NA -0.0955
57167 ENSG00000277039 NA -0.0955
57166 ENSG00000277035 NA -0.0955
57165 ENSG00000277034 NA -0.0955
57164 ENSG00000277031 RN7SL796P RNA, 7SL, cytoplasmic 796, pseudogene -0.0955
57163 ENSG00000277030 MIR8071-2 microRNA 8071-2 -0.0955
57162 ENSG00000277029 RNU6-1192P RNA, U6 small nuclear 1192, pseudogene -0.0955
10 ENSG00000123416 TUBA1B tubulin alpha 1b 22.1265

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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