SHOGoiN Cell Transcriptome: GSM1677489

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677489


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T17The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 133.4398
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 119.6476
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 84.5276
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 54.4230
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 47.0647
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 38.5285
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 29.4646
8 ENSG00000184009 ACTG1 actin gamma 1 28.7891
9 ENSG00000283041 NA 27.8435
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 19.0033

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277020 NA -0.0955
57169 ENSG00000277017 NA -0.0955
57168 ENSG00000277014 MIR3179-4 microRNA 3179-4 -0.0955
57167 ENSG00000277013 NA -0.0955
57166 ENSG00000277011 NA -0.0955
57165 ENSG00000277010 NA -0.0955
57164 ENSG00000277009 NA -0.0955
57163 ENSG00000277008 TEX28P2 testis expressed 28 pseudogene 2 -0.0955
57162 ENSG00000277007 NA -0.0955
10 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 19.0033

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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