SHOGoiN Cell Transcriptome: GSM1677491

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677491


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T19The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 147.2931
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 79.2827
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 66.9231
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 56.9600
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 45.7822
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 41.0140
7 ENSG00000184009 ACTG1 actin gamma 1 40.1482
8 ENSG00000283041 NA 37.6205
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.6298
10 ENSG00000162493 PDPN podoplanin 23.8986

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277057 MIR6779 microRNA 6779 -0.1066
57170 ENSG00000277056 NA -0.1066
57168 ENSG00000277052 MIR6763 microRNA 6763 -0.1066
57167 ENSG00000277051 NA -0.1066
57166 ENSG00000277050 NA -0.1066
57165 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.1066
57163 ENSG00000277047 NA -0.1066
10 ENSG00000162493 PDPN podoplanin 23.8986
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.6298
8 ENSG00000283041 NA 37.6205

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...