SHOGoiN Cell Transcriptome: GSM1677492

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677492


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T20The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 125.1796
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 108.9949
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 75.3462
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 58.1290
5 ENSG00000184009 ACTG1 actin gamma 1 55.9230
6 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 49.5753
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.1541
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.1110
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.2252
10 ENSG00000283041 NA 29.4056

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.0896
57170 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.0896
57168 ENSG00000276993 NA -0.0896
57167 ENSG00000276992 NA -0.0896
57166 ENSG00000276991 NA -0.0896
57163 ENSG00000276988 NA -0.0896
10 ENSG00000283041 NA 29.4056
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.2252
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.1110
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.1541

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...