SHOGoiN Cell Transcriptome: GSM1677493

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677493


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T21The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 154.6709
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.8049
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 70.1743
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 61.6460
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 51.3564
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 47.3978
7 ENSG00000184009 ACTG1 actin gamma 1 39.7636
8 ENSG00000283041 NA 31.0242
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 26.3242
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 24.5044

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277004 RNA5SP412 RNA, 5S ribosomal pseudogene 412 -0.1009
57170 ENSG00000277003 NA -0.1009
57168 ENSG00000277001 NA -0.1009
57167 ENSG00000277000 DUSP12P1 dual specificity phosphatase 12 pseudogene 1 -0.1009
57166 ENSG00000276998 REXO1L2P REXO1 like 2, pseudogene -0.1009
57164 ENSG00000276993 NA -0.1009
57163 ENSG00000276992 NA -0.1009
57162 ENSG00000276991 NA -0.1009
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 24.5044
9 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 26.3242

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...