SHOGoiN Cell Transcriptome: GSM1677495

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677495


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T23The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 148.3809
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 73.4125
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 64.6231
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 62.2270
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 57.9561
6 ENSG00000283041 NA 51.9029
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 40.4599
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.3673
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.3142
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 33.1690

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277099 NA -0.0839
57169 ENSG00000277096 NA -0.0839
57168 ENSG00000277095 NA -0.0839
57166 ENSG00000277089 NA -0.0839
57165 ENSG00000277087 NA -0.0839
57164 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0839
57163 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0839
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 33.1690
9 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 33.3142
8 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 37.3673

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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