SHOGoiN Cell Transcriptome: GSM1677498

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677498


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T26The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 118.4430
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 95.6862
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 92.1299
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 53.0743
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 47.2363
6 ENSG00000283041 NA 39.6474
7 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 38.7993
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.9759
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.5336
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.1828

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277129 NA -0.1074
57170 ENSG00000277128 NA -0.1074
57169 ENSG00000277127 NA -0.1074
57168 ENSG00000277125 NA -0.1074
57167 ENSG00000277124 NA -0.1074
57163 ENSG00000277120 MIR6089 microRNA 6089 -0.1074
57162 ENSG00000277119 NA -0.1074
10 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 27.1828
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 34.5336
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 37.9759

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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