SHOGoiN Cell Transcriptome: GSM1677500

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677500


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T28The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 165.7444
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 72.8399
3 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 65.1781
4 ENSG00000283041 NA 51.0437
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 49.5274
6 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 39.2838
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.6475
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 37.2293
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 28.9385
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 25.2912

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277099 NA -0.0903
57168 ENSG00000277096 NA -0.0903
57167 ENSG00000277095 NA -0.0903
57165 ENSG00000277089 NA -0.0903
57164 ENSG00000277087 NA -0.0903
57163 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0903
57162 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0903
10 ENSG00000234782 TPT1P9 tumor protein, translationally-controlled 1 pseudogene 9 25.2912
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 28.9385
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 37.2293

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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