SHOGoiN Cell Transcriptome: GSM1677501

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677501


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T29The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 184.2270
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 82.6523
3 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 75.4305
4 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 44.6764
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 38.3368
6 ENSG00000283041 NA 33.3943
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 32.5051
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 30.5411
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 24.0126
10 ENSG00000204628 RACK1 receptor for activated C kinase 1 18.2895

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0584
57170 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0584
57168 ENSG00000277081 NA -0.0584
57167 ENSG00000277077 NA -0.0584
57166 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.0584
57164 ENSG00000277073 MIR6131 microRNA 6131 -0.0584
57163 ENSG00000277067 uncharacterized LOC102724843 -0.0584
57162 ENSG00000277066 NA -0.0584
10 ENSG00000204628 RACK1 receptor for activated C kinase 1 18.2895
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 24.0126

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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