SHOGoiN Cell Transcriptome: GSM1677504

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677504


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T32The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 166.9026
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 72.6546
3 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 66.4499
4 ENSG00000283041 NA 55.3371
5 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 51.6267
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.7445
7 ENSG00000204628 RACK1 receptor for activated C kinase 1 30.8228
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.7759
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.2968
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.9718

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0864
57169 ENSG00000277109 NA -0.0864
57168 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.0864
57165 ENSG00000277103 NA -0.0864
57162 ENSG00000277099 NA -0.0864
10 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 26.9718
9 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 30.2968
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 30.7759
7 ENSG00000204628 RACK1 receptor for activated C kinase 1 30.8228
6 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 31.7445

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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