SHOGoiN Cell Transcriptome: GSM1677505

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677505


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T33The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 137.7245
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 106.6647
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 90.4286
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 46.9369
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 40.4871
6 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 31.5360
7 ENSG00000184009 ACTG1 actin gamma 1 30.5346
8 ENSG00000198727 MT-CYB mitochondrially encoded cytochrome b 28.9692
9 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 28.0203
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.9765

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277138 MIR6509 microRNA 6509 -0.0923
57169 ENSG00000277136 NA -0.0923
57168 ENSG00000277135 NA -0.0923
57167 ENSG00000277133 NA -0.0923
57166 ENSG00000277130 NA -0.0923
57165 ENSG00000277129 NA -0.0923
57164 ENSG00000277128 NA -0.0923
57163 ENSG00000277127 NA -0.0923
57162 ENSG00000277125 NA -0.0923
10 ENSG00000198763 MT-ND2 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 2 27.9765

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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