SHOGoiN Cell Transcriptome: GSM1677506

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677506


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T34The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 149.1303
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 101.2837
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 89.7085
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 42.0601
5 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 39.3142
6 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 36.3768
7 ENSG00000283041 NA 35.6743
8 ENSG00000184009 ACTG1 actin gamma 1 33.8291
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.3931
10 ENSG00000075624 ACTB actin beta 25.0806

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277096 NA -0.0863
57169 ENSG00000277095 NA -0.0863
57167 ENSG00000277089 NA -0.0863
57166 ENSG00000277087 NA -0.0863
57165 ENSG00000277084 RNU2-4P RNA, U2 small nuclear 4, pseudogene -0.0863
57164 ENSG00000277083 PRSS3P3 PRSS3 pseudogene 3 -0.0863
57162 ENSG00000277081 NA -0.0863
10 ENSG00000075624 ACTB actin beta 25.0806
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 25.3931
8 ENSG00000184009 ACTG1 actin gamma 1 33.8291

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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