SHOGoiN Cell Transcriptome: GSM1677507

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677507


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T35The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 155.9459
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 72.4499
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 66.2074
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 59.3474
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 52.5508
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.0408
7 ENSG00000283041 NA 40.5310
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 34.7198
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.4716
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 20.1328

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277117 ICOS ligand -0.1005
57168 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.1005
57167 ENSG00000277109 NA -0.1005
57166 ENSG00000277108 SNORD49B small nucleolar RNA, C/D box 49B -0.1005
57163 ENSG00000277103 NA -0.1005
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 20.1328
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 22.4716
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 34.7198
7 ENSG00000283041 NA 40.5310
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 42.0408

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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