SHOGoiN Cell Transcriptome: GSM1677510

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677510


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T38The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 172.3209
2 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 108.9024
3 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 62.5622
4 ENSG00000198899 MT-ATP6 mitochondrially encoded ATP synthase membrane subunit 6 34.1305
5 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 27.0389
6 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 26.6799
7 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 25.6453
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 24.6957
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 24.6262
10 ENSG00000283041 NA 24.1861

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277128 NA -0.0765
57170 ENSG00000277127 NA -0.0765
57169 ENSG00000277125 NA -0.0765
57168 ENSG00000277124 NA -0.0765
57164 ENSG00000277120 MIR6089 microRNA 6089 -0.0765
57163 ENSG00000277119 NA -0.0765
57162 ENSG00000277118 NA -0.0765
10 ENSG00000283041 NA 24.1861
9 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 24.6262
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 24.6957

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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