SHOGoiN Cell Transcriptome: GSM1677513

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677513


Profile download
7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T41The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 155.3819
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 67.1917
3 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 62.4658
4 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 57.0458
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 50.3665
6 ENSG00000283041 NA 38.9977
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.5874
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.0042
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 26.3374
10 ENSG00000236552 RPL13AP5 ribosomal protein L13a pseudogene 5 24.3235

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277103 NA -0.1132
57167 ENSG00000277099 NA -0.1132
57165 ENSG00000277096 NA -0.1132
57164 ENSG00000277095 NA -0.1132
57162 ENSG00000277089 NA -0.1132
10 ENSG00000236552 RPL13AP5 ribosomal protein L13a pseudogene 5 24.3235
9 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 26.3374
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 28.0042
7 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 35.5874
6 ENSG00000283041 NA 38.9977

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

full download

Now loading...