SHOGoiN Cell Transcriptome: GSM1677514

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677514


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T42The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 145.3401
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 81.3188
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 63.1743
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 59.7365
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 53.0380
6 ENSG00000283041 NA 44.8351
7 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 38.5347
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 34.8669
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.3810
10 ENSG00000204628 RACK1 receptor for activated C kinase 1 21.7308

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277081 NA -0.1169
57169 ENSG00000277077 NA -0.1169
57168 ENSG00000277075 HIST1H2AE histone cluster 1 H2A family member e -0.1169
57166 ENSG00000277073 MIR6131 microRNA 6131 -0.1169
57165 ENSG00000277072 STAG3L2 stromal antigen 3-like 2 (pseudogene) -0.1169
57164 ENSG00000277067 uncharacterized LOC102724843 -0.1169
57162 ENSG00000277063 MIR8084 microRNA 8084 -0.1169
10 ENSG00000204628 RACK1 receptor for activated C kinase 1 21.7308
9 ENSG00000198786 MT-ND5 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 5 24.3810
8 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 34.8669

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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