SHOGoiN Cell Transcriptome: GSM1677515

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677515


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T43The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 157.0500
2 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 82.2745
3 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 70.8831
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 63.0566
5 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 55.1870
6 ENSG00000283041 NA 43.2449
7 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 39.8981
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 33.5628
9 ENSG00000184009 ACTG1 actin gamma 1 29.7198
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 23.7144

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57170 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0866
57169 ENSG00000277057 MIR6779 microRNA 6779 -0.0866
57168 ENSG00000277056 NA -0.0866
57166 ENSG00000277052 MIR6763 microRNA 6763 -0.0866
57165 ENSG00000277051 NA -0.0866
57164 ENSG00000277050 NA -0.0866
57163 ENSG00000277049 RNA5SP530 RNA, 5S ribosomal pseudogene 530 -0.0866
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 23.7144
9 ENSG00000184009 ACTG1 actin gamma 1 29.7198
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 33.5628

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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