SHOGoiN Cell Transcriptome: GSM1677517

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677517


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T45The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 153.7469
2 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 68.0372
3 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 63.2931
4 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 62.5299
5 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 60.9272
6 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 51.9300
7 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 49.8610
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 42.7928
9 ENSG00000283041 NA 35.1380
10 ENSG00000123416 TUBA1B tubulin alpha 1b 28.7299

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57169 ENSG00000277120 MIR6089 microRNA 6089 -0.0756
57168 ENSG00000277119 NA -0.0756
57167 ENSG00000277118 NA -0.0756
57166 ENSG00000277117 ICOS ligand -0.0756
57163 ENSG00000277112 ANKRD20A21P ankyrin repeat domain 20 family member A21, pseudogene -0.0756
57162 ENSG00000277109 NA -0.0756
10 ENSG00000123416 TUBA1B tubulin alpha 1b 28.7299
9 ENSG00000283041 NA 35.1380
8 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 42.7928
7 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 49.8610

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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