SHOGoiN Cell Transcriptome: GSM1677520

Expression ProfileSHOGoiN Cell IdProject NameProject IdAssay IdProjectAssaySource CellTechnologyData
Project TitleAssay TypeSource Cell TypeSource OrganismSource Tissue Or OrganAssay TechnologyAssay Detection InstrumentationData Type

GSM1677520


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7000000000000000000000-766Sequence Read ArchiveSRP050499SRP050499_T48The Transcriptome and DNA Methylome Landscapes of Human Primordial Germ CellsTranscriptomePrimordial germ cellHumanEarly embryonic tissueRNA-seqHiSeq 2500Sequence

Histogram (Expression count)

Top 10 up-regulated genes

RankENSGGene symbolDescriptionZ-score
1 ENSG00000198804 MT-CO1 mitochondrially encoded cytochrome c oxidase I 159.4722
2 ENSG00000196205 EEF1A1P5 eukaryotic translation elongation factor 1 alpha 1 pseudogene 5 96.4361
3 ENSG00000198886 MT-ND4 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 4 53.0384
4 ENSG00000156508 EEF1A1 eukaryotic translation elongation factor 1 alpha 1 44.1705
5 ENSG00000229638 RPL4P4 ribosomal protein L4 pseudogene 4 40.8794
6 ENSG00000213553 RPLP0P6 ribosomal protein lateral stalk subunit P0 pseudogene 6 40.6372
7 ENSG00000233476 EEF1A1P6 eukaryotic translation elongation factor 1 alpha 1 pseudogene 6 38.9917
8 ENSG00000184009 ACTG1 actin gamma 1 36.4516
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.7761
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 29.5876

Bottom 10 down-regulated genes

RankENSGGene symbolDescriptionZ-score
57171 ENSG00000277063 MIR8084 microRNA 8084 -0.0896
57170 ENSG00000277062 RN7SL88P RNA, 7SL, cytoplasmic 88, pseudogene -0.0896
57168 ENSG00000277058 HNRNPCL3 heterogeneous nuclear ribonucleoprotein C-like 3 -0.0896
57167 ENSG00000277057 MIR6779 microRNA 6779 -0.0896
57166 ENSG00000277056 NA -0.0896
57164 ENSG00000277052 MIR6763 microRNA 6763 -0.0896
57163 ENSG00000277051 NA -0.0896
57162 ENSG00000277050 NA -0.0896
10 ENSG00000225178 RPSAP58 ribosomal protein SA pseudogene 58 29.5876
9 ENSG00000198888 MT-ND1 mitochondrially encoded NADH:ubiquinone oxidoreductase core subunit 1 30.7761

SOM(Self Organization Map)

Expression around clicked position: full download

RankENSGGene symbolDescriptionZ-score

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